Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | S699 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1472662 bp
Thymine Count
1466137 bp
Guanine Count
3644885 bp
Cytosine Count
3653095 bp
Genome Length
10236779 bp
Protein-coding Genes
9577 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf4142 domain-containing protein | RAM_RS12795 | Not Available | Negative | 2705103 - 2705894 | 27795.8 |
| hypothetical protein | RAM_RS12800 | Not Available | Negative | 2705878 - 2706480 | 20909.8 |
| sigma-70 family rna polymerase sigma factor | RAM_RS12805 | Not Available | Positive | 2706721 - 2707281 | 21023.9 |
| zf-hc2 domain-containing protein | RAM_RS12810 | Not Available | Positive | 2707289 - 2708077 | 27135.8 |
| duf1996 domain-containing protein | RAM_RS12815 | Not Available | Positive | 2708354 - 2709760 | 50158.8 |
| sco0930 family lipoprotein | RAM_RS12820 | Not Available | Positive | 2709801 - 2710727 | 30800.4 |
| lrp/asnc family transcriptional regulator | RAM_RS12825 | Not Available | Negative | 2711573 - 2712637 | 37280.4 |
| m20 metallopeptidase family protein | RAM_RS12830 | Not Available | Positive | 2712706 - 2713905 | 42170.9 |
| hypothetical protein | RAM_RS12835 | Not Available | Positive | 2713983 - 2714177 | 6773.26 |
| metal-dependent hydrolase family protein | RAM_RS12840 | Not Available | Positive | 2714174 - 2715376 | 41745.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
