Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | S699 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1472662 bp
Thymine Count
1466137 bp
Guanine Count
3644885 bp
Cytosine Count
3653095 bp
Genome Length
10236779 bp
Protein-coding Genes
9577 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acyl-coa thioesterase | RAM_RS12455 | Not Available | Positive | 2631192 - 2632088 | 32891.2 |
| helix-turn-helix domain-containing protein | RAM_RS12460 | Not Available | Positive | 2632437 - 2633339 | 33238.6 |
| duf397 domain-containing protein | RAM_RS12465 | Not Available | Positive | 2633353 - 2633556 | 6837.91 |
| hypothetical protein | RAM_RS12470 | Not Available | Positive | 2633716 - 2633925 | 7749.18 |
| helix-turn-helix transcriptional regulator | RAM_RS12475 | Not Available | Positive | 2633976 - 2636990 | 107148.0 |
| succinic semialdehyde dehydrogenase | RAM_RS12480 | Not Available | Negative | 2637132 - 2638742 | 56195.2 |
| hypothetical protein | RAM_RS12485 | Not Available | Negative | 2638846 - 2639745 | 30987.7 |
| tetr/acrr family transcriptional regulator | RAM_RS12490 | Not Available | Negative | 2639819 - 2640436 | 22327.7 |
| acyl-coa dehydrogenase family protein | RAM_RS12495 | Not Available | Positive | 2640532 - 2641683 | 41787.0 |
| caib/baif coa transferase family protein | RAM_RS12500 | Not Available | Positive | 2641695 - 2642831 | 39283.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
