Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | S699 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1472662 bp
Thymine Count
1466137 bp
Guanine Count
3644885 bp
Cytosine Count
3653095 bp
Genome Length
10236779 bp
Protein-coding Genes
9577 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna (n6-isopentenyl adenosine(37)-c2)-methylthiotransferase miab | RAM_RS12005 | Not Available | Positive | 2536429 - 2537922 | 53937.1 |
| membrane protein | RAM_RS12010 | Not Available | Positive | 2537919 - 2538392 | 16464.0 |
| hypothetical protein | RAM_RS12015 | Not Available | Negative | 2538412 - 2538858 | 15339.4 |
| duf349 domain-containing protein | RAM_RS12020 | Not Available | Negative | 2539401 - 2540714 | 48663.5 |
| trna (adenosine(37)-n6)-dimethylallyltransferase miaa | RAM_RS12025 | Not Available | Positive | 2540933 - 2541844 | 32634.8 |
| diaminopimelate epimerase | RAM_RS12030 | Not Available | Positive | 2541855 - 2542682 | 28694.9 |
| valine--trna ligase | RAM_RS12035 | Not Available | Negative | 2542699 - 2545212 | 93062.3 |
| mfs transporter | RAM_RS12040 | Not Available | Negative | 2545222 - 2546475 | 43585.1 |
| arsr/smtb family transcription factor | RAM_RS12045 | Not Available | Positive | 2546539 - 2547042 | 18436.0 |
| gtpase hflx | RAM_RS12050 | Not Available | Positive | 2547085 - 2548533 | 52482.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
