Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | S699 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1472662 bp
Thymine Count
1466137 bp
Guanine Count
3644885 bp
Cytosine Count
3653095 bp
Genome Length
10236779 bp
Protein-coding Genes
9577 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | RAM_RS11860 | Not Available | Positive | 2508942 - 2509229 | 10332.1 |
| hypothetical protein | RAM_RS11865 | Not Available | Positive | 2509226 - 2510050 | 31065.9 |
| fumarate reductase/succinate dehydrogenase flavoprotein subunit | RAM_RS11870 | Not Available | Positive | 2510115 - 2512031 | 69805.7 |
| succinate dehydrogenase/fumarate reductase iron-sulfur subunit | RAM_RS11875 | Not Available | Positive | 2512105 - 2512857 | 28646.2 |
| gnat family n-acetyltransferase | RAM_RS11880 | Not Available | Positive | 2512939 - 2513463 | 19050.7 |
| duf397 domain-containing protein | RAM_RS11885 | Not Available | Negative | 2513527 - 2513712 | 6658.76 |
| helix-turn-helix domain-containing protein | RAM_RS11890 | Not Available | Negative | 2513716 - 2514567 | 32786.8 |
| yoak family protein | RAM_RS11895 | Not Available | Positive | 2514776 - 2515486 | 23555.1 |
| hypothetical protein | RAM_RS49135 | Not Available | Positive | 2515586 - 2515741 | 5516.68 |
| sdr family nad(p)-dependent oxidoreductase | RAM_RS11900 | Not Available | Negative | 2515738 - 2516475 | 25469.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
