Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | S699 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1472662 bp
Thymine Count
1466137 bp
Guanine Count
3644885 bp
Cytosine Count
3653095 bp
Genome Length
10236779 bp
Protein-coding Genes
9577 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 4-hydroxythreonine-4-phosphate dehydrogenase pdxa | RAM_RS11805 | Not Available | Negative | 2498522 - 2499550 | 35987.2 |
| hsp70 family protein | RAM_RS11815 | Not Available | Positive | 2499997 - 2501841 | 64087.3 |
| duf3046 domain-containing protein | RAM_RS11820 | Not Available | Positive | 2501887 - 2502081 | 7067.56 |
| recombinase reca | RAM_RS11825 | Not Available | Positive | 2502321 - 2503367 | 37086.6 |
| regulatory protein recx | RAM_RS11830 | Not Available | Positive | 2503631 - 2504158 | 19761.5 |
| hypothetical protein | RAM_RS11835 | Not Available | Positive | 2504158 - 2504373 | 7898.11 |
| mfs transporter | RAM_RS11840 | Not Available | Negative | 2504401 - 2505663 | 45112.4 |
| hypothetical protein | RAM_RS11845 | Not Available | Negative | 2505725 - 2505982 | 9776.82 |
| bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | RAM_RS11850 | Not Available | Negative | 2506197 - 2506802 | 20093.3 |
| phosphogluconate dehydratase | RAM_RS11855 | Not Available | Negative | 2506799 - 2508688 | 65788.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
