Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | S699 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1472662 bp
Thymine Count
1466137 bp
Guanine Count
3644885 bp
Cytosine Count
3653095 bp
Genome Length
10236779 bp
Protein-coding Genes
9577 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | RAM_RS50210 | Not Available | Positive | 2475150 - 2475560 | 13608.2 |
| cgnr zinc finger domain-containing protein | RAM_RS11710 | Not Available | Positive | 2475801 - 2476322 | 18287.6 |
| llm class f420-dependent oxidoreductase | RAM_RS11715 | Not Available | Negative | 2476326 - 2477105 | 28623.9 |
| phytoene/squalene synthase family protein | RAM_RS11720 | Not Available | Negative | 2477102 - 2478028 | 33947.9 |
| phytoene desaturase family protein | RAM_RS11725 | Not Available | Negative | 2478025 - 2479497 | 52233.6 |
| polyprenyl synthetase family protein | RAM_RS11730 | Not Available | Negative | 2479499 - 2480590 | 37467.6 |
| organomercurial lyase | RAM_RS11735 | Not Available | Negative | 2480651 - 2481340 | 24930.5 |
| methylenetetrahydrofolate reductase | RAM_RS11740 | Not Available | Positive | 2481436 - 2482320 | 32315.8 |
| duf885 domain-containing protein | RAM_RS11745 | Not Available | Positive | 2482425 - 2484113 | 61133.0 |
| dmt family transporter | RAM_RS11750 | Not Available | Positive | 2484478 - 2485347 | 28986.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
