Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | S699 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1472662 bp
Thymine Count
1466137 bp
Guanine Count
3644885 bp
Cytosine Count
3653095 bp
Genome Length
10236779 bp
Protein-coding Genes
9577 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| redox-sensitive transcriptional activator soxr | RAM_RS11420 | Not Available | Negative | 2416944 - 2417405 | 16842.1 |
| thiamine pyrophosphate-dependent enzyme | RAM_RS11425 | Not Available | Positive | 2417458 - 2418150 | 24540.2 |
| transketolase family protein | RAM_RS11430 | Not Available | Positive | 2418156 - 2419085 | 32624.9 |
| nudix hydrolase | RAM_RS11435 | Not Available | Positive | 2419096 - 2419521 | 15977.1 |
| nipsnap family protein | RAM_RS11440 | Not Available | Negative | 2419507 - 2420073 | 21138.9 |
| acyl-coa dehydrogenase family protein | RAM_RS11445 | Not Available | Negative | 2420111 - 2421283 | 41820.9 |
| hypothetical protein | RAM_RS49575 | Not Available | Negative | 2421332 - 2421508 | 6582.76 |
| hypothetical protein | RAM_RS11450 | Not Available | Positive | 2421680 - 2422543 | 30952.5 |
| imidazole glycerol phosphate synthase subunit hish | RAM_RS11455 | Not Available | Positive | 2422576 - 2423193 | 21941.9 |
| bifunctional 1-(5-phosphoribosyl)-5-((5- phosphoribosylamino)methylideneamino)imidazole-4- carboxamide isomerase/phosphoribosylanthranilate isomerase pria | RAM_RS11460 | Not Available | Positive | 2423230 - 2423967 | 25548.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
