Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | S699 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1472662 bp
Thymine Count
1466137 bp
Guanine Count
3644885 bp
Cytosine Count
3653095 bp
Genome Length
10236779 bp
Protein-coding Genes
9577 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ubiquinol-cytochrome c reductase iron-sulfur subunit | RAM_RS11125 | Not Available | Positive | 2353507 - 2354673 | 42830.9 |
| cytochrome b | RAM_RS11130 | Not Available | Positive | 2354670 - 2356352 | 61613.9 |
| ydei/ompd-associated family protein | RAM_RS11135 | Not Available | Negative | 2356408 - 2356590 | 6516.76 |
| lrp/asnc family transcriptional regulator | RAM_RS11140 | Not Available | Negative | 2356587 - 2356868 | 9713.49 |
| dedd exonuclease domain-containing protein | RAM_RS11145 | Not Available | Negative | 2357228 - 2358931 | 60658.9 |
| nyn domain-containing protein | RAM_RS11150 | Not Available | Positive | 2359050 - 2360447 | 49120.2 |
| hypothetical protein | RAM_RS11155 | Not Available | Positive | 2360514 - 2360771 | 9118.92 |
| c40 family peptidase | RAM_RS11160 | Not Available | Positive | 2361215 - 2362273 | 36564.0 |
| glycosyltransferase family 4 protein | RAM_RS11165 | Not Available | Positive | 2362412 - 2363569 | 41668.3 |
| uridine kinase | RAM_RS11170 | Not Available | Negative | 2363566 - 2364180 | 22194.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
