Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | S699 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1472662 bp
Thymine Count
1466137 bp
Guanine Count
3644885 bp
Cytosine Count
3653095 bp
Genome Length
10236779 bp
Protein-coding Genes
9577 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| smi1/knr4 family protein | RAM_RS10985 | Not Available | Negative | 2326744 - 2327703 | 33782.4 |
| taxi family trap transporter solute-binding subunit | RAM_RS10990 | Not Available | Negative | 2327714 - 2328688 | 33365.1 |
| trap transporter permease | RAM_RS10995 | Not Available | Negative | 2328685 - 2330670 | 69698.0 |
| leucyl aminopeptidase | RAM_RS11000 | Not Available | Negative | 2330752 - 2332251 | 51121.4 |
| hypothetical protein | RAM_RS11005 | Not Available | Positive | 2332361 - 2333209 | 27790.8 |
| duf402 domain-containing protein | RAM_RS11010 | Not Available | Positive | 2333202 - 2333852 | 24593.7 |
| hypothetical protein | RAM_RS11015 | Not Available | Negative | 2333809 - 2334108 | 10288.0 |
| branched-chain amino acid aminotransferase | RAM_RS11020 | Not Available | Positive | 2334206 - 2335309 | 39528.8 |
| nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase | RAM_RS11025 | Not Available | Negative | 2335422 - 2336498 | 36252.6 |
| ispd/tari family cytidylyltransferase | RAM_RS11030 | Not Available | Positive | 2336941 - 2337618 | 23984.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
