Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | S699 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1472662 bp
Thymine Count
1466137 bp
Guanine Count
3644885 bp
Cytosine Count
3653095 bp
Genome Length
10236779 bp
Protein-coding Genes
9577 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| low temperature requirement protein a | RAM_RS10890 | Not Available | Positive | 2305774 - 2306958 | 42023.3 |
| 16s ribosomal rna | Not Available | Not Available | Positive | 2307319 - 2308835 | Not Available |
| 23s ribosomal rna | Not Available | Not Available | Positive | 2309161 - 2312284 | Not Available |
| 5s ribosomal rna | Not Available | Not Available | Positive | 2312357 - 2312473 | Not Available |
| l,d-transpeptidase | RAM_RS10910 | Not Available | Negative | 2312883 - 2314094 | 42181.3 |
| patatin-like phospholipase family protein | RAM_RS10915 | Not Available | Negative | 2314198 - 2315067 | 30032.7 |
| deda family protein | RAM_RS10920 | Not Available | Negative | 2315085 - 2315732 | 22677.2 |
| lipoyl synthase | RAM_RS10925 | Not Available | Negative | 2315777 - 2316778 | 36806.1 |
| oxidoreductase | RAM_RS10930 | Not Available | Negative | 2316804 - 2317754 | 32641.9 |
| hypothetical protein | RAM_RS10935 | Not Available | Negative | 2317773 - 2318294 | 19229.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
