Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | S699 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1472662 bp
Thymine Count
1466137 bp
Guanine Count
3644885 bp
Cytosine Count
3653095 bp
Genome Length
10236779 bp
Protein-coding Genes
9577 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ddda-like double-stranded dna deaminase toxin | RAM_RS10740 | Not Available | Negative | 2273738 - 2274514 | 26913.5 |
| s1 family peptidase | RAM_RS10745 | Not Available | Negative | 2274592 - 2275401 | 28340.3 |
| hypothetical protein | RAM_RS10750 | Not Available | Negative | 2275483 - 2275893 | 15072.1 |
| hypothetical protein | RAM_RS10755 | Not Available | Negative | 2275890 - 2276303 | 14401.3 |
| hypothetical protein | RAM_RS10760 | Not Available | Negative | 2276300 - 2276719 | 15125.4 |
| helix-turn-helix domain-containing protein | RAM_RS10765 | Not Available | Positive | 2277157 - 2278662 | 54056.4 |
| alpha/beta hydrolase | RAM_RS10770 | Not Available | Negative | 2278672 - 2279496 | 29781.9 |
| deaminase | RAM_RS47405 | Not Available | Positive | 2279830 - 2281389 | 57039.8 |
| thif family adenylyltransferase | RAM_RS10780 | Not Available | Negative | 2282131 - 2283597 | 53389.8 |
| hypothetical protein | RAM_RS10785 | Not Available | Negative | 2283579 - 2283959 | 14206.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
