Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | S699 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1472662 bp
Thymine Count
1466137 bp
Guanine Count
3644885 bp
Cytosine Count
3653095 bp
Genome Length
10236779 bp
Protein-coding Genes
9577 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tetr/acrr family transcriptional regulator | RAM_RS00985 | Not Available | Positive | 207589 - 208182 | 21596.8 |
| nuclear transport factor 2 family protein | RAM_RS00990 | Not Available | Positive | 208179 - 208664 | 17671.4 |
| helix-turn-helix domain-containing protein | RAM_RS00995 | Not Available | Negative | 208687 - 209547 | 30942.6 |
| btad domain-containing putative transcriptional regulator | RAM_RS01000 | Not Available | Negative | 209557 - 212658 | 109049.0 |
| degt/dnrj/eryc1/strs family aminotransferase | RAM_RS01005 | Not Available | Positive | 212786 - 213919 | 40144.5 |
| nad-dependent epimerase/dehydratase family protein | RAM_RS01010 | Not Available | Positive | 213943 - 214872 | 34082.7 |
| glycosyltransferase family 4 protein | RAM_RS01015 | Not Available | Positive | 214905 - 216101 | 43450.4 |
| acyltransferase | RAM_RS01020 | Not Available | Positive | 216088 - 216714 | 22936.2 |
| sige family rna polymerase sigma factor | RAM_RS01025 | Not Available | Positive | 216980 - 217492 | 19108.7 |
| hypothetical protein | RAM_RS01030 | Not Available | Positive | 217489 - 218199 | 24973.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
