Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | S699 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1472662 bp
Thymine Count
1466137 bp
Guanine Count
3644885 bp
Cytosine Count
3653095 bp
Genome Length
10236779 bp
Protein-coding Genes
9577 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pyruvate dehydrogenase (acetyl-transferring), homodimeric type | RAM_RS10655 | Not Available | Negative | 2256886 - 2259681 | 102753.0 |
| duf3052 domain-containing protein | RAM_RS10660 | Not Available | Positive | 2260099 - 2260530 | 15350.9 |
| peroxiredoxin | RAM_RS10665 | Not Available | Positive | 2260604 - 2261068 | 16911.8 |
| Trna-val | Not Available | Not Available | Positive | 2261109 - 2261183 | Not Available |
| recombinase family protein | RAM_RS47400 | Not Available | Negative | 2261140 - 2262885 | 64411.4 |
| recombinase family protein | RAM_RS50195 | Not Available | Negative | 2262915 - 2263370 | 16655.5 |
| hypothetical protein | RAM_RS10685 | Not Available | Negative | 2263553 - 2263909 | 12620.8 |
| dna-methyltransferase | RAM_RS10690 | Not Available | Negative | 2263985 - 2265022 | 37628.1 |
| replication-relaxation family protein | RAM_RS10695 | Not Available | Negative | 2265019 - 2265834 | 30065.1 |
| type iv secretory system conjugative dna transfer family protein | RAM_RS10700 | Not Available | Negative | 2265959 - 2268121 | 77236.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
