Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | S699 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1472662 bp
Thymine Count
1466137 bp
Guanine Count
3644885 bp
Cytosine Count
3653095 bp
Genome Length
10236779 bp
Protein-coding Genes
9577 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptidylprolyl isomerase | RAM_RS10255 | Not Available | Negative | 2178344 - 2179003 | 23278.2 |
| duf2631 domain-containing protein | RAM_RS10260 | Not Available | Negative | 2179029 - 2179286 | 9643.87 |
| 1-deoxy-d-xylulose-5-phosphate reductoisomerase | RAM_RS10265 | Not Available | Positive | 2179381 - 2180583 | 41649.6 |
| m50 family metallopeptidase | RAM_RS10270 | Not Available | Positive | 2180587 - 2181813 | 43837.8 |
| flavodoxin-dependent (e)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase | RAM_RS10275 | Not Available | Positive | 2181927 - 2183078 | 40403.8 |
| class i sam-dependent methyltransferase | RAM_RS10280 | Not Available | Positive | 2183146 - 2183769 | 22109.2 |
| hypothetical protein | RAM_RS10285 | Not Available | Negative | 2183758 - 2184012 | 8916.54 |
| helix-turn-helix domain-containing protein | RAM_RS10290 | Not Available | Positive | 2184128 - 2184955 | 30336.5 |
| voc family protein | RAM_RS10295 | Not Available | Positive | 2184960 - 2185352 | 13933.3 |
| duf4177 domain-containing protein | RAM_RS10300 | Not Available | Negative | 2185596 - 2185802 | 7543.16 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
