Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | S699 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1472662 bp
Thymine Count
1466137 bp
Guanine Count
3644885 bp
Cytosine Count
3653095 bp
Genome Length
10236779 bp
Protein-coding Genes
9577 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| yran family protein | RAM_RS09920 | Not Available | Positive | 2104298 - 2104675 | 14457.4 |
| yifb family mg chelatase-like aaa atpase | RAM_RS09925 | Not Available | Positive | 2104675 - 2106186 | 52645.6 |
| hypothetical protein | RAM_RS09930 | Not Available | Positive | 2106593 - 2107186 | 20092.7 |
| dna-processing protein dpra | RAM_RS09935 | Not Available | Positive | 2107183 - 2108325 | 39556.2 |
| tyrosine recombinase xerc | RAM_RS09940 | Not Available | Positive | 2108429 - 2109409 | 34455.4 |
| flia/whig family rna polymerase sigma factor | RAM_RS09945 | Not Available | Positive | 2109519 - 2110367 | 30684.5 |
| m23 family metallopeptidase | RAM_RS09950 | Not Available | Negative | 2110368 - 2111003 | 21806.1 |
| 30s ribosomal protein s2 | RAM_RS09955 | Not Available | Positive | 2111937 - 2112812 | 31732.9 |
| translation elongation factor ts | RAM_RS09960 | Not Available | Positive | 2112903 - 2113718 | 29345.0 |
| ump kinase | RAM_RS09965 | Not Available | Positive | 2113836 - 2114579 | 26438.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
