Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | S699 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1472662 bp
Thymine Count
1466137 bp
Guanine Count
3644885 bp
Cytosine Count
3653095 bp
Genome Length
10236779 bp
Protein-coding Genes
9577 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cpbp family intramembrane glutamic endopeptidase | RAM_RS09870 | Not Available | Positive | 2097627 - 2098430 | 28686.5 |
| 30s ribosomal protein s16 | RAM_RS09875 | Not Available | Positive | 2098602 - 2099045 | 16096.3 |
| rna-binding protein | RAM_RS09880 | Not Available | Positive | 2099042 - 2099281 | 8588.37 |
| ribosome maturation factor rimm | RAM_RS09885 | Not Available | Positive | 2099303 - 2099815 | 18327.9 |
| hypothetical protein | RAM_RS09890 | Not Available | Positive | 2099812 - 2100516 | 25742.9 |
| trna (guanosine(37)-n1)-methyltransferase trmd | RAM_RS09895 | Not Available | Positive | 2100521 - 2101282 | 27753.1 |
| 50s ribosomal protein l19 | RAM_RS09900 | Not Available | Positive | 2101435 - 2101803 | 14053.9 |
| signal peptidase i | RAM_RS09905 | Not Available | Positive | 2101835 - 2102770 | 33611.2 |
| ribonuclease hii | RAM_RS09910 | Not Available | Positive | 2102861 - 2103703 | 29424.5 |
| duf2469 domain-containing protein | RAM_RS09915 | Not Available | Positive | 2103700 - 2104023 | 12697.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
