Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | S699 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1472662 bp
Thymine Count
1466137 bp
Guanine Count
3644885 bp
Cytosine Count
3653095 bp
Genome Length
10236779 bp
Protein-coding Genes
9577 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sensor domain-containing diguanylate cyclase | RAM_RS09820 | Not Available | Negative | 2086713 - 2088017 | 46531.3 |
| glucose 1-dehydrogenase | RAM_RS09825 | Not Available | Negative | 2088608 - 2089360 | 25004.7 |
| tetr/acrr family transcriptional regulator | RAM_RS09830 | Not Available | Negative | 2089384 - 2089971 | 21175.4 |
| hypothetical protein | RAM_RS09835 | Not Available | Positive | 2090092 - 2090454 | 12092.3 |
| ku protein | RAM_RS09840 | Not Available | Positive | 2090507 - 2091388 | 32140.2 |
| marr family winged helix-turn-helix transcriptional regulator | RAM_RS09845 | Not Available | Negative | 2091667 - 2092146 | 17799.2 |
| abc transporter atp-binding protein | RAM_RS09850 | Not Available | Negative | 2092156 - 2093934 | 63431.1 |
| signal recognition particle protein | RAM_RS09855 | Not Available | Positive | 2094130 - 2095668 | 54474.2 |
| amidohydrolase family protein | RAM_RS09860 | Not Available | Positive | 2095677 - 2096753 | 37588.9 |
| cpbp family intramembrane glutamic endopeptidase | RAM_RS09865 | Not Available | Positive | 2096800 - 2097525 | 25730.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
