Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | S699 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1472662 bp
Thymine Count
1466137 bp
Guanine Count
3644885 bp
Cytosine Count
3653095 bp
Genome Length
10236779 bp
Protein-coding Genes
9577 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sugar abc transporter substrate-binding protein | RAM_RS09525 | Not Available | Negative | 2023280 - 2024278 | 33767.8 |
| tim barrel protein | RAM_RS09530 | Not Available | Negative | 2024302 - 2025180 | 30913.7 |
| laci family dna-binding transcriptional regulator | RAM_RS09535 | Not Available | Positive | 2025292 - 2026329 | 36679.1 |
| gfo/idh/moca family oxidoreductase | RAM_RS09540 | Not Available | Positive | 2026411 - 2027409 | 34709.0 |
| asparagine synthase (glutamine-hydrolyzing) | RAM_RS09545 | Not Available | Negative | 2027432 - 2029273 | 68857.8 |
| k(+)-transporting atpase subunit f | RAM_RS09550 | Not Available | Positive | 2029676 - 2029777 | 3389.32 |
| potassium-transporting atpase subunit kdpa | RAM_RS09555 | Not Available | Positive | 2029815 - 2031476 | 57010.8 |
| potassium-transporting atpase subunit kdpb | RAM_RS09560 | Not Available | Positive | 2031473 - 2033518 | 71955.6 |
| potassium-transporting atpase subunit c | RAM_RS09565 | Not Available | Positive | 2033525 - 2034115 | 19857.8 |
| duf4118 domain-containing protein | RAM_RS09570 | Not Available | Positive | 2034120 - 2036657 | 89625.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
