Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | S699 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1472662 bp
Thymine Count
1466137 bp
Guanine Count
3644885 bp
Cytosine Count
3653095 bp
Genome Length
10236779 bp
Protein-coding Genes
9577 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| coa transferase subunit a | RAM_RS09375 | Not Available | Positive | 1990579 - 1991388 | 29240.0 |
| coa-transferase subunit beta | RAM_RS09380 | Not Available | Positive | 1991385 - 1992143 | 26552.7 |
| thiolase family protein | RAM_RS09385 | Not Available | Positive | 1992140 - 1993321 | 40904.4 |
| protocatechuate 3,4-dioxygenase subunit beta | RAM_RS09390 | Not Available | Positive | 1993332 - 1994069 | 27817.3 |
| protocatechuate 3,4-dioxygenase subunit alpha | RAM_RS09395 | Not Available | Positive | 1994069 - 1994623 | 19883.3 |
| 3-oxoadipate enol-lactonase | RAM_RS09400 | Not Available | Positive | 1994623 - 1995405 | 27574.4 |
| 4-carboxymuconolactone decarboxylase | RAM_RS09405 | Not Available | Positive | 1995402 - 1995803 | 14167.6 |
| iclr family transcriptional regulator c-terminal domain-containing protein | RAM_RS09410 | Not Available | Positive | 1995813 - 1996646 | 29682.5 |
| ntp transferase domain-containing protein | RAM_RS09415 | Not Available | Positive | 1996734 - 1997315 | 19788.7 |
| aaa family atpase | RAM_RS09420 | Not Available | Positive | 1997334 - 1998203 | 32354.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
