Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | S699 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1472662 bp
Thymine Count
1466137 bp
Guanine Count
3644885 bp
Cytosine Count
3653095 bp
Genome Length
10236779 bp
Protein-coding Genes
9577 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | RAM_RS09325 | Not Available | Positive | 1979480 - 1979890 | 14838.7 |
| iron-sulfur cluster biosynthesis family protein | RAM_RS09330 | Not Available | Positive | 1979967 - 1980260 | 9814.31 |
| glycerate kinase | RAM_RS09335 | Not Available | Negative | 1980571 - 1981692 | 36937.2 |
| 2-hydroxyacid dehydrogenase | RAM_RS09340 | Not Available | Negative | 1981689 - 1982633 | 32802.6 |
| alpha-galactosidase | RAM_RS09345 | Not Available | Negative | 1982664 - 1984760 | 77322.3 |
| rok family protein | RAM_RS09350 | Not Available | Positive | 1984837 - 1986006 | 40090.8 |
| abc transporter substrate-binding protein | RAM_RS09355 | Not Available | Positive | 1986026 - 1987288 | 44786.9 |
| carbohydrate abc transporter permease | RAM_RS09360 | Not Available | Positive | 1987285 - 1988241 | 34229.3 |
| carbohydrate abc transporter permease | RAM_RS09365 | Not Available | Positive | 1988241 - 1989074 | 30216.4 |
| glycoside hydrolase family 27 protein | RAM_RS09370 | Not Available | Positive | 1989251 - 1990405 | 41522.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
