Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | S699 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1472662 bp
Thymine Count
1466137 bp
Guanine Count
3644885 bp
Cytosine Count
3653095 bp
Genome Length
10236779 bp
Protein-coding Genes
9577 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sugar abc transporter atp-binding protein | RAM_RS09280 | Not Available | Positive | 1971703 - 1973226 | 53740.0 |
| abc transporter permease | RAM_RS09285 | Not Available | Positive | 1973223 - 1974236 | 34624.3 |
| fadr/gntr family transcriptional regulator | RAM_RS09290 | Not Available | Negative | 1974279 - 1975025 | 26617.6 |
| hypothetical protein | RAM_RS49115 | Not Available | Positive | 1975107 - 1975250 | 5332.51 |
| aldo/keto reductase | RAM_RS09295 | Not Available | Positive | 1975256 - 1976224 | 34460.9 |
| amidohydrolase family protein | RAM_RS09300 | Not Available | Positive | 1976221 - 1977072 | 30254.9 |
| rna polymerase sigma factor shba | RAM_RS09305 | Not Available | Negative | 1977108 - 1977695 | 21252.7 |
| duf202 domain-containing protein | RAM_RS09310 | Not Available | Negative | 1978018 - 1978314 | 9928.16 |
| yidh family protein | RAM_RS09315 | Not Available | Negative | 1978486 - 1978839 | 12143.1 |
| gtra family protein | RAM_RS09320 | Not Available | Negative | 1978851 - 1979330 | 17150.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
