Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | S699 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1472662 bp
Thymine Count
1466137 bp
Guanine Count
3644885 bp
Cytosine Count
3653095 bp
Genome Length
10236779 bp
Protein-coding Genes
9577 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gaf domain-containing protein | RAM_RS47275 | Not Available | Positive | 177818 - 179260 | 49231.6 |
| response regulator | RAM_RS00845 | Not Available | Negative | 179457 - 180083 | 22814.7 |
| excalibur calcium-binding domain-containing protein | RAM_RS00850 | Not Available | Positive | 180369 - 180851 | 16479.7 |
| class f sortase | RAM_RS00855 | Not Available | Positive | 180848 - 181498 | 22226.5 |
| helicase-associated domain-containing protein | RAM_RS00860 | Not Available | Negative | 181468 - 183744 | 80044.2 |
| thermonuclease family protein | RAM_RS00865 | Not Available | Negative | 183759 - 184562 | 26540.5 |
| 3'-5' exonuclease | RAM_RS00870 | Not Available | Positive | 184754 - 186139 | 46729.1 |
| duf3024 domain-containing protein | RAM_RS00875 | Not Available | Positive | 186210 - 186548 | 12859.3 |
| nucleotide pyrophosphohydrolase | RAM_RS00880 | Not Available | Negative | 186545 - 186862 | 11778.9 |
| nitrate- and nitrite sensing domain-containing protein | RAM_RS00885 | Not Available | Positive | 186998 - 187918 | 32909.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
