Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | S699 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1472662 bp
Thymine Count
1466137 bp
Guanine Count
3644885 bp
Cytosine Count
3653095 bp
Genome Length
10236779 bp
Protein-coding Genes
9577 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aldehyde dehydrogenase family protein | RAM_RS09130 | Not Available | Positive | 1940395 - 1941762 | 48359.4 |
| 3-oxoacyl-acp reductase | RAM_RS09135 | Not Available | Positive | 1941762 - 1942529 | 26762.8 |
| hypothetical protein | RAM_RS09140 | Not Available | Negative | 1942526 - 1942723 | 7321.17 |
| helix-turn-helix domain-containing protein | RAM_RS09145 | Not Available | Positive | 1942796 - 1944100 | 47415.1 |
| aminomethyl-transferring glycine dehydrogenase | RAM_RS09150 | Not Available | Positive | 1944427 - 1947276 | 100701.0 |
| glycine cleavage system aminomethyltransferase gcvt | RAM_RS09155 | Not Available | Positive | 1947280 - 1948371 | 38676.0 |
| glycine cleavage system protein gcvh | RAM_RS09160 | Not Available | Positive | 1948384 - 1948761 | 13319.4 |
| serine hydroxymethyltransferase | RAM_RS09165 | Not Available | Positive | 1948761 - 1950035 | 45748.6 |
| lipoyl synthase | RAM_RS09170 | Not Available | Positive | 1950032 - 1951033 | 36923.1 |
| l-serine ammonia-lyase | RAM_RS09175 | Not Available | Positive | 1951048 - 1952415 | 47849.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
