Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | S699 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1472662 bp
Thymine Count
1466137 bp
Guanine Count
3644885 bp
Cytosine Count
3653095 bp
Genome Length
10236779 bp
Protein-coding Genes
9577 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mce family protein | RAM_RS08980 | Not Available | Negative | 1909882 - 1911156 | 44442.4 |
| mlae family abc transporter permease | RAM_RS08985 | Not Available | Negative | 1911153 - 1912004 | 30041.9 |
| mlae family abc transporter permease | RAM_RS08990 | Not Available | Negative | 1912006 - 1912800 | 27644.3 |
| llm class flavin-dependent oxidoreductase | RAM_RS08995 | Not Available | Negative | 1913266 - 1914258 | 35406.1 |
| fad-dependent monooxygenase | RAM_RS09000 | Not Available | Negative | 1914267 - 1915646 | 48930.0 |
| helix-turn-helix domain-containing protein | RAM_RS09005 | Not Available | Positive | 1915704 - 1915907 | 7194.42 |
| clp protease n-terminal domain-containing protein | RAM_RS09010 | Not Available | Positive | 1915909 - 1916379 | 16623.3 |
| helix-turn-helix domain-containing protein | RAM_RS09015 | Not Available | Positive | 1916456 - 1920235 | 135018.0 |
| held family protein | RAM_RS09020 | Not Available | Negative | 1920446 - 1922560 | 77899.3 |
| 16s rrna (guanine(966)-n(2))-methyltransferase rsmd | RAM_RS09025 | Not Available | Positive | 1922755 - 1923315 | 18942.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
