Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | S699 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1472662 bp
Thymine Count
1466137 bp
Guanine Count
3644885 bp
Cytosine Count
3653095 bp
Genome Length
10236779 bp
Protein-coding Genes
9577 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| substrate-binding and vwa domain-containing protein | RAM_RS00790 | Not Available | Negative | 164742 - 166550 | 63651.9 |
| homogentisate 1,2-dioxygenase | RAM_RS00795 | Not Available | Negative | 166631 - 167803 | 43057.4 |
| hypothetical protein | RAM_RS00800 | Not Available | Positive | 167889 - 168743 | 30116.2 |
| iclr family transcriptional regulator | RAM_RS00805 | Not Available | Positive | 168740 - 169384 | 21648.3 |
| duf998 domain-containing protein | RAM_RS00810 | Not Available | Negative | 169381 - 170043 | 23097.8 |
| tmem165/gdt1 family protein | RAM_RS00815 | Not Available | Negative | 170100 - 170687 | 20138.1 |
| s41 family peptidase | RAM_RS00820 | Not Available | Positive | 170874 - 171833 | 34631.5 |
| cytochrome ubiquinol oxidase subunit i | RAM_RS00825 | Not Available | Positive | 171913 - 173388 | 53736.4 |
| cytochrome d ubiquinol oxidase subunit ii | RAM_RS00830 | Not Available | Positive | 173503 - 174510 | 36252.8 |
| thiol reductant abc exporter subunit cydc | RAM_RS00835 | Not Available | Positive | 174597 - 177770 | 108791.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
