Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | S699 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1472662 bp
Thymine Count
1466137 bp
Guanine Count
3644885 bp
Cytosine Count
3653095 bp
Genome Length
10236779 bp
Protein-coding Genes
9577 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | RAM_RS08680 | Not Available | Negative | 1846572 - 1847150 | 19624.3 |
| hypothetical protein | RAM_RS08685 | Not Available | Negative | 1847203 - 1847457 | 8887.84 |
| mbl fold metallo-hydrolase | RAM_RS08690 | Not Available | Negative | 1847548 - 1848255 | 25359.1 |
| iclr family transcriptional regulator | RAM_RS08695 | Not Available | Negative | 1848299 - 1849000 | 24344.3 |
| 3-isopropylmalate dehydratase large subunit | RAM_RS08700 | Not Available | Positive | 1849143 - 1850576 | 51170.0 |
| 3-isopropylmalate dehydratase small subunit | RAM_RS08705 | Not Available | Positive | 1850598 - 1851200 | 22212.2 |
| hu family dna-binding protein | RAM_RS08710 | Not Available | Positive | 1851433 - 1852218 | 26452.8 |
| afsr/sarp family transcriptional regulator | RAM_RS08715 | Not Available | Positive | 1852791 - 1855604 | 100591.0 |
| nudix hydrolase | RAM_RS08720 | Not Available | Negative | 1855761 - 1856714 | 34185.5 |
| rna degradosome polyphosphate kinase | RAM_RS08725 | Not Available | Negative | 1856711 - 1859092 | 87549.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
