Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | S699 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1472662 bp
Thymine Count
1466137 bp
Guanine Count
3644885 bp
Cytosine Count
3653095 bp
Genome Length
10236779 bp
Protein-coding Genes
9577 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-gln | Not Available | Not Available | Positive | 1820222 - 1820293 | Not Available |
| Trna-glu | Not Available | Not Available | Positive | 1820395 - 1820470 | Not Available |
| hu family dna-binding protein | RAM_RS08590 | Not Available | Positive | 1820950 - 1821627 | 22740.5 |
| atp-binding protein | RAM_RS08595 | Not Available | Negative | 1821846 - 1824794 | 106864.0 |
| helix-turn-helix domain-containing protein | RAM_RS08600 | Not Available | Negative | 1824980 - 1825891 | 32428.5 |
| hypothetical protein | RAM_RS08605 | Not Available | Negative | 1825904 - 1826113 | 7309.93 |
| sam-dependent methyltransferase | RAM_RS08610 | Not Available | Positive | 1827388 - 1828254 | 32238.0 |
| duf6292 family protein | RAM_RS08615 | Not Available | Negative | 1828348 - 1828731 | 13643.7 |
| alpha-l-arabinofuranosidase b | RAM_RS08620 | Not Available | Negative | 1828839 - 1830374 | 52739.7 |
| nad(p)/fad-dependent oxidoreductase | RAM_RS08625 | Not Available | Positive | 1830808 - 1832265 | 53237.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
