Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | S699 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1472662 bp
Thymine Count
1466137 bp
Guanine Count
3644885 bp
Cytosine Count
3653095 bp
Genome Length
10236779 bp
Protein-coding Genes
9577 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tigr03620 family f420-dependent llm class oxidoreductase | RAM_RS08530 | Not Available | Negative | 1805662 - 1806486 | 29338.9 |
| tigr03620 family f420-dependent llm class oxidoreductase | RAM_RS08535 | Not Available | Negative | 1806483 - 1807379 | 31983.1 |
| tetr/acrr family transcriptional regulator | RAM_RS08540 | Not Available | Positive | 1807470 - 1808033 | 20741.8 |
| phosphoglycerate dehydrogenase | RAM_RS08545 | Not Available | Positive | 1808159 - 1809757 | 55457.6 |
| s8 family serine peptidase | RAM_RS08550 | Not Available | Positive | 1809988 - 1813365 | 114634.0 |
| 3-isopropylmalate dehydrogenase | RAM_RS08555 | Not Available | Positive | 1813594 - 1814631 | 36443.4 |
| citramalate synthase | RAM_RS08560 | Not Available | Positive | 1815168 - 1816772 | 56785.3 |
| fumarylacetoacetate hydrolase family protein | RAM_RS08565 | Not Available | Positive | 1816851 - 1817621 | 27031.3 |
| fad-dependent oxidoreductase | RAM_RS08570 | Not Available | Negative | 1817689 - 1818936 | 46039.0 |
| had family hydrolase | RAM_RS08575 | Not Available | Positive | 1819437 - 1820171 | 26431.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
