Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | S699 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1472662 bp
Thymine Count
1466137 bp
Guanine Count
3644885 bp
Cytosine Count
3653095 bp
Genome Length
10236779 bp
Protein-coding Genes
9577 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | RAM_RS08240 | Not Available | Positive | 1744890 - 1745159 | 9437.61 |
| nadar family protein | RAM_RS08245 | Not Available | Negative | 1745161 - 1745730 | 21268.4 |
| threonine ammonia-lyase ilva | RAM_RS08250 | Not Available | Negative | 1745751 - 1747007 | 44513.3 |
| sige family rna polymerase sigma factor | RAM_RS08255 | Not Available | Positive | 1747096 - 1747587 | 18417.8 |
| hypothetical protein | RAM_RS08260 | Not Available | Positive | 1747584 - 1748579 | 35576.7 |
| short-chain fatty acyl-coa regulator family protein | RAM_RS08265 | Not Available | Negative | 1748580 - 1750004 | 52083.1 |
| isocitrate lyase | RAM_RS08270 | Not Available | Positive | 1750233 - 1751513 | 46872.8 |
| malate synthase a | RAM_RS08275 | Not Available | Positive | 1751609 - 1753216 | 59710.9 |
| histidine kinase | RAM_RS08280 | Not Available | Negative | 1753336 - 1754886 | 54626.3 |
| hypothetical protein | RAM_RS49105 | Not Available | Positive | 1754988 - 1755149 | 5493.46 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
