Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | S699 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1472662 bp
Thymine Count
1466137 bp
Guanine Count
3644885 bp
Cytosine Count
3653095 bp
Genome Length
10236779 bp
Protein-coding Genes
9577 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | RAM_RS08040 | Not Available | Negative | 1704462 - 1705511 | 36693.7 |
| atp-binding cassette domain-containing protein | RAM_RS08045 | Not Available | Negative | 1705508 - 1706272 | 27197.0 |
| class i mannose-6-phosphate isomerase | RAM_RS08050 | Not Available | Negative | 1706269 - 1707306 | 37177.6 |
| laci family dna-binding transcriptional regulator | RAM_RS08055 | Not Available | Negative | 1707303 - 1708286 | 34940.8 |
| gh92 family glycosyl hydrolase | RAM_RS08060 | Not Available | Positive | 1708602 - 1711835 | 110978.0 |
| gh92 family glycosyl hydrolase | RAM_RS08065 | Not Available | Positive | 1711895 - 1714282 | 85121.8 |
| duf3817 domain-containing protein | RAM_RS08070 | Not Available | Positive | 1714514 - 1714879 | 12987.3 |
| marr family winged helix-turn-helix transcriptional regulator | RAM_RS08075 | Not Available | Negative | 1714963 - 1715463 | 18360.2 |
| mth1187 family thiamine-binding protein | RAM_RS08080 | Not Available | Positive | 1715543 - 1715845 | 10466.4 |
| hypothetical protein | RAM_RS08085 | Not Available | Negative | 1715942 - 1716349 | 13952.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
