Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | S699 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1472662 bp
Thymine Count
1466137 bp
Guanine Count
3644885 bp
Cytosine Count
3653095 bp
Genome Length
10236779 bp
Protein-coding Genes
9577 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| carboxymuconolactone decarboxylase family protein | RAM_RS07990 | Not Available | Positive | 1695282 - 1695743 | 16902.1 |
| isocitrate lyase/pep mutase family protein | RAM_RS07995 | Not Available | Positive | 1695740 - 1696477 | 24755.4 |
| cation acetate symporter | RAM_RS08000 | Not Available | Negative | 1696544 - 1698151 | 55432.9 |
| duf485 domain-containing protein | RAM_RS08005 | Not Available | Negative | 1698148 - 1698510 | 13702.4 |
| cation acetate symporter | RAM_RS08010 | Not Available | Negative | 1698581 - 1700305 | 60017.6 |
| hypothetical protein | RAM_RS08015 | Not Available | Negative | 1700305 - 1700652 | 13127.4 |
| lytr/algr family response regulator transcription factor | RAM_RS08020 | Not Available | Negative | 1700678 - 1701433 | 27025.7 |
| sensor histidine kinase | RAM_RS08025 | Not Available | Negative | 1701430 - 1702476 | 37491.1 |
| hypothetical protein | RAM_RS08030 | Not Available | Negative | 1702525 - 1703220 | 25990.1 |
| abc transporter substrate-binding protein | RAM_RS08035 | Not Available | Negative | 1703425 - 1704420 | 33489.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
