Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | S699 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1472662 bp
Thymine Count
1466137 bp
Guanine Count
3644885 bp
Cytosine Count
3653095 bp
Genome Length
10236779 bp
Protein-coding Genes
9577 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha-l-fucosidase | RAM_RS07740 | Not Available | Positive | 1641647 - 1643419 | 64678.2 |
| mgh1-like glycoside hydrolase domain-containing protein | RAM_RS07745 | Not Available | Negative | 1643460 - 1644689 | 44933.8 |
| rok family transcriptional regulator | RAM_RS07750 | Not Available | Positive | 1644751 - 1645905 | 39313.4 |
| protease pro-enzyme activation domain-containing protein | RAM_RS07755 | Not Available | Positive | 1646209 - 1648140 | 67454.4 |
| sensor histidine kinase | RAM_RS07760 | Not Available | Negative | 1648231 - 1649766 | 53395.1 |
| purine-cytosine permease family protein | RAM_RS07765 | Not Available | Positive | 1649901 - 1651274 | 47123.1 |
| sdr family nad(p)-dependent oxidoreductase | RAM_RS07770 | Not Available | Positive | 1651319 - 1651990 | 23051.4 |
| s-adenosylmethionine:trna ribosyltransferase-isomerase | RAM_RS07775 | Not Available | Positive | 1651987 - 1652994 | 35529.5 |
| hypothetical protein | RAM_RS07780 | Not Available | Negative | 1653355 - 1653735 | 12813.0 |
| abc transporter substrate-binding protein | RAM_RS07785 | Not Available | Positive | 1653944 - 1654996 | 36352.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
