Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | S699 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1472662 bp
Thymine Count
1466137 bp
Guanine Count
3644885 bp
Cytosine Count
3653095 bp
Genome Length
10236779 bp
Protein-coding Genes
9577 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf6923 family protein | RAM_RS07690 | Not Available | Positive | 1626531 - 1627838 | 44300.3 |
| autoinducer 2 abc transporter substrate-binding protein | RAM_RS07695 | Not Available | Negative | 1627845 - 1628861 | 34924.1 |
| duf4396 domain-containing protein | RAM_RS07700 | Not Available | Positive | 1629122 - 1629577 | 15516.3 |
| glycoside hydrolase family 88 protein | RAM_RS07705 | Not Available | Negative | 1629615 - 1630862 | 44899.9 |
| hypothetical protein | RAM_RS07710 | Not Available | Negative | 1631080 - 1632303 | 42334.9 |
| metal-dependent hydrolase | RAM_RS07715 | Not Available | Negative | 1632823 - 1635761 | 104945.0 |
| hypothetical protein | RAM_RS07720 | Not Available | Positive | 1635873 - 1636529 | 22128.7 |
| alkaline phosphatase d family protein | RAM_RS07725 | Not Available | Positive | 1636561 - 1638132 | 56934.1 |
| glycoside hydrolase family 28 protein | RAM_RS07730 | Not Available | Positive | 1638449 - 1639930 | 51171.5 |
| glycoside hydrolase family 105 protein | RAM_RS07735 | Not Available | Negative | 1640107 - 1641294 | 43943.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
