Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | S699 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1472662 bp
Thymine Count
1466137 bp
Guanine Count
3644885 bp
Cytosine Count
3653095 bp
Genome Length
10236779 bp
Protein-coding Genes
9577 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycoside hydrolase family 88 protein | RAM_RS07640 | Not Available | Negative | 1614375 - 1615454 | 39119.1 |
| fadr/gntr family transcriptional regulator | RAM_RS07645 | Not Available | Negative | 1615524 - 1616192 | 23851.7 |
| abc transporter permease | RAM_RS07650 | Not Available | Negative | 1616195 - 1617220 | 34744.5 |
| sugar abc transporter atp-binding protein | RAM_RS07655 | Not Available | Negative | 1617217 - 1618755 | 55168.8 |
| substrate-binding domain-containing protein | RAM_RS07660 | Not Available | Negative | 1618819 - 1619793 | 33172.1 |
| capa family protein | RAM_RS07665 | Not Available | Positive | 1620160 - 1621302 | 39499.5 |
| family 2 encapsulin nanocompartment cargo protein polyprenyl transferase | RAM_RS07670 | Not Available | Negative | 1621465 - 1622484 | 35019.6 |
| family 2b encapsulin nanocompartment shell protein | RAM_RS07675 | Not Available | Negative | 1622484 - 1623875 | 51232.0 |
| family 2b encapsulin nanocompartment shell protein | RAM_RS07680 | Not Available | Negative | 1623872 - 1625278 | 51240.4 |
| duf4239 domain-containing protein | RAM_RS07685 | Not Available | Positive | 1625767 - 1626534 | 26828.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
