Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | S699 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1472662 bp
Thymine Count
1466137 bp
Guanine Count
3644885 bp
Cytosine Count
3653095 bp
Genome Length
10236779 bp
Protein-coding Genes
9577 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| coce/nond family hydrolase | RAM_RS07395 | Not Available | Negative | 1559885 - 1561561 | 61343.4 |
| gaf domain-containing sensor histidine kinase | RAM_RS07400 | Not Available | Positive | 1561727 - 1562830 | 39199.4 |
| response regulator transcription factor | RAM_RS07405 | Not Available | Positive | 1562851 - 1563429 | 20215.5 |
| tyrosine-type recombinase/integrase | RAM_RS07410 | Not Available | Negative | 1563568 - 1564686 | 41787.7 |
| helix-turn-helix domain-containing protein | RAM_RS07415 | Not Available | Negative | 1564806 - 1565114 | 11276.3 |
| Trna-ala | Not Available | Not Available | Positive | 1565473 - 1565545 | Not Available |
| ricin domain-containing protein | RAM_RS07425 | Not Available | Positive | 1565815 - 1567992 | 77180.7 |
| hded family acid-resistance protein | RAM_RS07430 | Not Available | Positive | 1568138 - 1568707 | 19703.2 |
| ribonuclease z | RAM_RS07435 | Not Available | Positive | 1568721 - 1569635 | 33803.0 |
| response regulator | RAM_RS07440 | Not Available | Positive | 1569658 - 1571310 | 59291.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
