Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | S699 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1472662 bp
Thymine Count
1466137 bp
Guanine Count
3644885 bp
Cytosine Count
3653095 bp
Genome Length
10236779 bp
Protein-coding Genes
9577 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| marr family winged helix-turn-helix transcriptional regulator | RAM_RS07350 | Not Available | Positive | 1551285 - 1551707 | 15925.8 |
| carotenoid oxygenase family protein | RAM_RS07355 | Not Available | Positive | 1551747 - 1553309 | 58172.3 |
| metal-dependent hydrolase | RAM_RS47370 | Not Available | Negative | 1553304 - 1553656 | 12858.3 |
| marr family winged helix-turn-helix transcriptional regulator | RAM_RS07360 | Not Available | Negative | 1553716 - 1554252 | 19960.8 |
| doxx family protein | RAM_RS07365 | Not Available | Positive | 1554358 - 1554738 | 12981.6 |
| nadp-dependent oxidoreductase | RAM_RS07370 | Not Available | Positive | 1554791 - 1555732 | 30472.7 |
| duf6069 family protein | RAM_RS07375 | Not Available | Positive | 1555828 - 1556256 | 14538.2 |
| dioxygenase | RAM_RS07380 | Not Available | Positive | 1556290 - 1557168 | 31841.9 |
| hydroxymethylglutaryl-coa lyase | RAM_RS07385 | Not Available | Negative | 1557305 - 1558240 | 32679.3 |
| amp-binding protein | RAM_RS07390 | Not Available | Negative | 1558242 - 1559888 | 59615.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
