Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | S699 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1472662 bp
Thymine Count
1466137 bp
Guanine Count
3644885 bp
Cytosine Count
3653095 bp
Genome Length
10236779 bp
Protein-coding Genes
9577 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | RAM_RS07055 | Not Available | Negative | 1491150 - 1491719 | 19627.9 |
| hypothetical protein | RAM_RS07060 | Not Available | Positive | 1491828 - 1492442 | 23138.4 |
| carboxymuconolactone decarboxylase family protein | RAM_RS07065 | Not Available | Positive | 1492511 - 1493002 | 17466.7 |
| mdr family mfs transporter | RAM_RS07070 | Not Available | Negative | 1492960 - 1494354 | 46936.7 |
| aldehyde dehydrogenase | RAM_RS07075 | Not Available | Negative | 1494351 - 1495805 | 51371.9 |
| tetr/acrr family transcriptional regulator | RAM_RS07080 | Not Available | Positive | 1495888 - 1496454 | 21041.2 |
| glycoside hydrolase family 15 protein | RAM_RS07085 | Not Available | Negative | 1496501 - 1498303 | 65682.3 |
| glucose 1-dehydrogenase | RAM_RS07090 | Not Available | Negative | 1498309 - 1499361 | 37359.8 |
| ricin domain-containing protein | RAM_RS07095 | Not Available | Negative | 1499525 - 1500979 | 51294.5 |
| lytic polysaccharide monooxygenase | RAM_RS07100 | Not Available | Negative | 1501156 - 1501818 | 24177.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
