Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | S699 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1472662 bp
Thymine Count
1466137 bp
Guanine Count
3644885 bp
Cytosine Count
3653095 bp
Genome Length
10236779 bp
Protein-coding Genes
9577 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | RAM_RS06500 | Not Available | Positive | 1371016 - 1371345 | 11642.4 |
| c40 family peptidase | RAM_RS06505 | Not Available | Positive | 1371342 - 1372460 | 38232.9 |
| hypothetical protein | RAM_RS06510 | Not Available | Positive | 1372464 - 1372847 | 13528.8 |
| ybab/ebfc family nucleoid-associated protein | RAM_RS06515 | Not Available | Positive | 1372844 - 1373338 | 17862.0 |
| 4-hydroxybenzoate 3-monooxygenase | RAM_RS06520 | Not Available | Negative | 1373335 - 1374477 | 41650.4 |
| helix-turn-helix domain-containing protein | RAM_RS06525 | Not Available | Negative | 1374550 - 1375320 | 27931.4 |
| duf664 domain-containing protein | RAM_RS06530 | Not Available | Negative | 1375358 - 1375849 | 18019.3 |
| glycoside hydrolase family 3 protein | RAM_RS06535 | Not Available | Positive | 1376004 - 1377836 | 65292.0 |
| ricin domain-containing protein | RAM_RS06540 | Not Available | Positive | 1377865 - 1379136 | 46016.0 |
| dna topoisomerase (atp-hydrolyzing) subunit a | RAM_RS06545 | Not Available | Negative | 1379179 - 1381665 | 89764.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
