Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | S699 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1472662 bp
Thymine Count
1466137 bp
Guanine Count
3644885 bp
Cytosine Count
3653095 bp
Genome Length
10236779 bp
Protein-coding Genes
9577 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sensor histidine kinase | RAM_RS06360 | Not Available | Negative | 1337083 - 1338216 | 41071.8 |
| sensor domain-containing protein | RAM_RS06365 | Not Available | Negative | 1338213 - 1338887 | 24560.2 |
| Tmrna,resume consensus sequence (at 88): aataagcgccgactccag | Not Available | Not Available | Positive | 1339040 - 1339405 | Not Available |
| hypothetical protein | RAM_RS49550 | Not Available | Positive | 1340080 - 1340235 | 5460.51 |
| sensor domain-containing diguanylate cyclase | RAM_RS50990 | Not Available | Negative | 1340240 - 1341478 | 44041.3 |
| mfs transporter | RAM_RS06375 | Not Available | Negative | 1341618 - 1342835 | 41198.2 |
| iclr family transcriptional regulator | RAM_RS06380 | Not Available | Negative | 1342957 - 1343739 | 27737.6 |
| histidine ammonia-lyase | RAM_RS06385 | Not Available | Positive | 1343824 - 1345350 | 53102.0 |
| urocanate hydratase | RAM_RS06390 | Not Available | Positive | 1345353 - 1347005 | 59683.6 |
| allantoate amidohydrolase | RAM_RS06395 | Not Available | Positive | 1347002 - 1348198 | 41407.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
