Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | S699 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1472662 bp
Thymine Count
1466137 bp
Guanine Count
3644885 bp
Cytosine Count
3653095 bp
Genome Length
10236779 bp
Protein-coding Genes
9577 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thif family adenylyltransferase | RAM_RS06260 | Not Available | Negative | 1318193 - 1319239 | 37411.3 |
| m48 family metallopeptidase | RAM_RS06265 | Not Available | Positive | 1319470 - 1319979 | 19282.2 |
| zinc-dependent metalloprotease | RAM_RS06270 | Not Available | Negative | 1320186 - 1321559 | 49120.6 |
| pdz domain-containing protein | RAM_RS06275 | Not Available | Positive | 1321661 - 1322767 | 38628.0 |
| ppa1309 family protein | RAM_RS06280 | Not Available | Negative | 1322764 - 1323315 | 19198.8 |
| upf0182 family protein | RAM_RS06285 | Not Available | Positive | 1323438 - 1326464 | 108430.0 |
| Trna-met | Not Available | Not Available | Positive | 1326532 - 1326605 | Not Available |
| fad-dependent monooxygenase | RAM_RS06295 | Not Available | Negative | 1326739 - 1328157 | 51326.2 |
| tetr/acrr family transcriptional regulator c-terminal domain-containing protein | RAM_RS06300 | Not Available | Positive | 1328252 - 1328836 | 21527.7 |
| Trna-met | Not Available | Not Available | Positive | 1328914 - 1328987 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
