Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | S699 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1472662 bp
Thymine Count
1466137 bp
Guanine Count
3644885 bp
Cytosine Count
3653095 bp
Genome Length
10236779 bp
Protein-coding Genes
9577 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bifunctional rnase h/acid phosphatase | RAM_RS05915 | Not Available | Positive | 1234131 - 1235339 | 42672.8 |
| hypothetical protein | RAM_RS05920 | Not Available | Positive | 1235539 - 1237281 | 61594.4 |
| slc13 family permease | RAM_RS05925 | Not Available | Negative | 1237265 - 1238506 | 42790.7 |
| helix-turn-helix transcriptional regulator | RAM_RS05930 | Not Available | Negative | 1238799 - 1241624 | 100606.0 |
| hypothetical protein | RAM_RS05935 | Not Available | Negative | 1241656 - 1242063 | 13562.5 |
| sigma-70 family rna polymerase sigma factor | RAM_RS05940 | Not Available | Negative | 1242060 - 1242638 | 21550.7 |
| duf4142 domain-containing protein | RAM_RS05945 | Not Available | Positive | 1242887 - 1243555 | 23350.9 |
| ferredoxin | RAM_RS05950 | Not Available | Positive | 1243564 - 1244376 | 28261.6 |
| nad(p)/fad-dependent oxidoreductase | RAM_RS05955 | Not Available | Positive | 1244373 - 1245608 | 43900.9 |
| Ncrna_class:rnase_p_rna | Not Available | Not Available | Positive | 1245629 - 1246033 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
