Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | S699 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1472662 bp
Thymine Count
1466137 bp
Guanine Count
3644885 bp
Cytosine Count
3653095 bp
Genome Length
10236779 bp
Protein-coding Genes
9577 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter atp-binding protein | RAM_RS00490 | Not Available | Positive | 101535 - 102701 | 42287.8 |
| abc transporter permease | RAM_RS00495 | Not Available | Positive | 102698 - 103477 | 27017.9 |
| glycine betaine abc transporter substrate-binding protein | RAM_RS00500 | Not Available | Positive | 103474 - 104433 | 34569.9 |
| duf6474 family protein | RAM_RS00505 | Not Available | Negative | 104642 - 105103 | 16220.7 |
| tm0106 family recb-like putative nuclease | RAM_RS00510 | Not Available | Positive | 105194 - 106834 | 60508.4 |
| padr family transcriptional regulator | RAM_RS00515 | Not Available | Positive | 106920 - 107552 | 24030.9 |
| class i sam-dependent methyltransferase | RAM_RS00520 | Not Available | Positive | 107686 - 108339 | 23802.2 |
| sdr family nad(p)-dependent oxidoreductase | RAM_RS00525 | Not Available | Negative | 108381 - 109139 | 25851.2 |
| udp-glucose dehydrogenase family protein | RAM_RS00530 | Not Available | Positive | 109341 - 110645 | 45368.6 |
| gamma-glutamyltransferase family protein | RAM_RS00535 | Not Available | Positive | 111192 - 112958 | 62469.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
