Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | S699 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1472662 bp
Thymine Count
1466137 bp
Guanine Count
3644885 bp
Cytosine Count
3653095 bp
Genome Length
10236779 bp
Protein-coding Genes
9577 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nitrite reductase large subunit nirb | RAM_RS05665 | Not Available | Positive | 1181356 - 1183878 | 88596.8 |
| nitrite reductase small subunit nird | RAM_RS05670 | Not Available | Positive | 1183875 - 1184216 | 12001.2 |
| uroporphyrinogen-iii synthase | RAM_RS05675 | Not Available | Positive | 1184213 - 1185316 | 37805.9 |
| duf4097 family beta strand repeat-containing protein | RAM_RS05680 | Not Available | Positive | 1185409 - 1186071 | 22215.1 |
| dna glycosylase alkz-like family protein | RAM_RS05685 | Not Available | Negative | 1186161 - 1187264 | 39444.6 |
| duf3224 domain-containing protein | RAM_RS05690 | Not Available | Negative | 1187274 - 1187669 | 13990.1 |
| helix-turn-helix transcriptional regulator | RAM_RS05695 | Not Available | Positive | 1187733 - 1188701 | 35956.0 |
| uroporphyrinogen-iii synthase | RAM_RS05700 | Not Available | Positive | 1188694 - 1189503 | 27757.3 |
| mgmt family protein | RAM_RS05705 | Not Available | Negative | 1189595 - 1189915 | 11650.9 |
| atp-dependent helicase | RAM_RS05710 | Not Available | Positive | 1190079 - 1193252 | 113281.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
