Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | S699 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1472662 bp
Thymine Count
1466137 bp
Guanine Count
3644885 bp
Cytosine Count
3653095 bp
Genome Length
10236779 bp
Protein-coding Genes
9577 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha-l-rhamnosidase c-terminal domain-containing protein | RAM_RS05570 | Not Available | Positive | 1158861 - 1161323 | 86326.6 |
| recb family exonuclease | RAM_RS05575 | Not Available | Positive | 1161597 - 1162448 | 31244.8 |
| hypothetical protein | RAM_RS05580 | Not Available | Positive | 1162461 - 1163054 | 19935.6 |
| hypothetical protein | RAM_RS05585 | Not Available | Negative | 1163189 - 1164502 | 45777.1 |
| dead/deah box helicase | RAM_RS05590 | Not Available | Negative | 1164529 - 1166325 | 64582.0 |
| ferritin-like fold-containing protein | RAM_RS05595 | Not Available | Positive | 1166556 - 1167209 | 23162.6 |
| duf3107 domain-containing protein | RAM_RS05600 | Not Available | Positive | 1167329 - 1167559 | 8246.85 |
| hypothetical protein | RAM_RS49835 | Not Available | Positive | 1167684 - 1167842 | 5764.93 |
| duf4873 domain-containing protein | RAM_RS05605 | Not Available | Negative | 1167911 - 1168228 | 11494.4 |
| tetr/acrr family transcriptional regulator | RAM_RS05610 | Not Available | Negative | 1168225 - 1168995 | 28668.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
