Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | S699 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1472662 bp
Thymine Count
1466137 bp
Guanine Count
3644885 bp
Cytosine Count
3653095 bp
Genome Length
10236779 bp
Protein-coding Genes
9577 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | RAM_RS05375 | Not Available | Negative | 1121785 - 1122750 | 33581.5 |
| mfs transporter | RAM_RS05380 | Not Available | Positive | 1122813 - 1124045 | 40865.7 |
| metal-dependent hydrolase | RAM_RS51280 | Not Available | Positive | 1124219 - 1125302 | 40670.4 |
| o-methyltransferase | RAM_RS05385 | Not Available | Negative | 1125434 - 1126078 | 22287.8 |
| rna polymerase sigma factor sige | RAM_RS05390 | Not Available | Positive | 1126290 - 1126880 | 22107.0 |
| anti-sigma factor family protein | RAM_RS05395 | Not Available | Positive | 1126877 - 1127527 | 21597.7 |
| s1c family serine protease | RAM_RS05400 | Not Available | Positive | 1128196 - 1129725 | 51271.8 |
| sec-independent protein translocase protein tatb | RAM_RS05405 | Not Available | Positive | 1129803 - 1130225 | 15152.0 |
| mrp/nbp35 family atp-binding protein | RAM_RS05410 | Not Available | Negative | 1130580 - 1131725 | 39663.3 |
| duf1003 domain-containing protein | RAM_RS05415 | Not Available | Negative | 1131736 - 1132236 | 19062.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
