Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | S699 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1472662 bp
Thymine Count
1466137 bp
Guanine Count
3644885 bp
Cytosine Count
3653095 bp
Genome Length
10236779 bp
Protein-coding Genes
9577 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytochrome d ubiquinol oxidase subunit ii | RAM_RS05325 | Not Available | Negative | 1114552 - 1115538 | 34737.9 |
| cytochrome ubiquinol oxidase subunit i | RAM_RS05330 | Not Available | Negative | 1115542 - 1116702 | 42044.4 |
| helix-turn-helix transcriptional regulator | RAM_RS05335 | Not Available | Positive | 1116763 - 1117080 | 11757.2 |
| permease prefix domain 1-containing protein | RAM_RS05340 | Not Available | Positive | 1117077 - 1117745 | 24190.7 |
| diviva domain-containing protein | RAM_RS05345 | Not Available | Positive | 1117742 - 1118065 | 11914.5 |
| srpbcc family protein | RAM_RS05350 | Not Available | Positive | 1118062 - 1118520 | 16535.9 |
| dna-3-methyladenine glycosylase i | RAM_RS05355 | Not Available | Positive | 1118513 - 1119076 | 20687.8 |
| enoyl-coa hydratase-related protein | RAM_RS05360 | Not Available | Negative | 1119097 - 1119891 | 27106.4 |
| duf3117 domain-containing protein | RAM_RS05365 | Not Available | Positive | 1120091 - 1120258 | 5634.9 |
| leucyl aminopeptidase family protein | RAM_RS05370 | Not Available | Positive | 1120349 - 1121860 | 52208.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
