Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | S699 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1472662 bp
Thymine Count
1466137 bp
Guanine Count
3644885 bp
Cytosine Count
3653095 bp
Genome Length
10236779 bp
Protein-coding Genes
9577 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| succinyl-diaminopimelate desuccinylase | RAM_RS05230 | Not Available | Positive | 1088086 - 1089156 | 37715.8 |
| duf3152 domain-containing protein | RAM_RS05235 | Not Available | Positive | 1089401 - 1090213 | 28253.2 |
| chitinase | RAM_RS05240 | Not Available | Negative | 1090210 - 1091262 | 36793.1 |
| m28 family peptidase | RAM_RS05245 | Not Available | Negative | 1091402 - 1093006 | 54664.2 |
| m4 family metallopeptidase | RAM_RS05250 | Not Available | Negative | 1093092 - 1095356 | 75977.5 |
| helix-turn-helix domain-containing protein | RAM_RS50975 | Not Available | Negative | 1095669 - 1096934 | 45225.1 |
| m4 family metallopeptidase | RAM_RS05260 | Not Available | Negative | 1097007 - 1099025 | 68266.8 |
| helix-turn-helix domain-containing protein | RAM_RS05265 | Not Available | Negative | 1099405 - 1100691 | 46594.9 |
| tigr00730 family rossman fold protein | RAM_RS05270 | Not Available | Positive | 1101105 - 1101890 | 28879.1 |
| tigr00730 family rossman fold protein | RAM_RS05275 | Not Available | Positive | 1101890 - 1102474 | 20365.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
