Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | S699 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1472662 bp
Thymine Count
1466137 bp
Guanine Count
3644885 bp
Cytosine Count
3653095 bp
Genome Length
10236779 bp
Protein-coding Genes
9577 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tigr03089 family protein | RAM_RS05080 | Not Available | Negative | 1059920 - 1060624 | 24604.9 |
| nad(p)h-binding protein | RAM_RS05085 | Not Available | Positive | 1060734 - 1061570 | 29074.3 |
| lcp family protein | RAM_RS05090 | Not Available | Negative | 1061563 - 1062762 | 41432.1 |
| lcp family protein | RAM_RS05095 | Not Available | Negative | 1062980 - 1064506 | 53402.8 |
| dtdp-glucose 4,6-dehydratase | RAM_RS05100 | Not Available | Positive | 1064644 - 1065633 | 35822.3 |
| dtdp-4-dehydrorhamnose reductase | RAM_RS05105 | Not Available | Positive | 1065639 - 1066544 | 31052.3 |
| glycosyltransferase family 4 protein | RAM_RS05110 | Not Available | Negative | 1066530 - 1067615 | 38635.4 |
| glycosyltransferase | RAM_RS05115 | Not Available | Negative | 1067608 - 1070118 | 91112.2 |
| glycosyltransferase family 2 protein | RAM_RS05120 | Not Available | Negative | 1070152 - 1071087 | 33142.8 |
| glycosyltransferase family 4 protein | RAM_RS05125 | Not Available | Positive | 1071097 - 1072173 | 37083.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
