Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | S699 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1472662 bp
Thymine Count
1466137 bp
Guanine Count
3644885 bp
Cytosine Count
3653095 bp
Genome Length
10236779 bp
Protein-coding Genes
9577 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| biotin--[acetyl-coa-carboxylase] ligase | RAM_RS04930 | Not Available | Positive | 1028530 - 1029327 | 27025.1 |
| ph domain-containing protein | RAM_RS04935 | Not Available | Positive | 1029412 - 1030002 | 21890.6 |
| hydroxymethylglutaryl-coa lyase | RAM_RS04940 | Not Available | Positive | 1030002 - 1030928 | 32409.8 |
| tnt domain-containing protein | RAM_RS04945 | Not Available | Positive | 1031156 - 1032139 | 34958.4 |
| hypothetical protein | RAM_RS04950 | Not Available | Positive | 1032139 - 1032399 | 9712.45 |
| gh92 family glycosyl hydrolase | RAM_RS04955 | Not Available | Negative | 1032425 - 1035685 | 115310.0 |
| histidinol-phosphatase | RAM_RS04960 | Not Available | Negative | 1035815 - 1036600 | 27954.5 |
| response regulator transcription factor | RAM_RS04965 | Not Available | Positive | 1036643 - 1037338 | 25491.8 |
| atp-binding protein | RAM_RS04970 | Not Available | Positive | 1037343 - 1038626 | 45440.7 |
| response regulator transcription factor | RAM_RS04975 | Not Available | Negative | 1038646 - 1039269 | 22674.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
