Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | S699 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1472662 bp
Thymine Count
1466137 bp
Guanine Count
3644885 bp
Cytosine Count
3653095 bp
Genome Length
10236779 bp
Protein-coding Genes
9577 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| class i sam-dependent methyltransferase | RAM_RS04880 | Not Available | Negative | 1021018 - 1021836 | 28762.8 |
| dihydrofolate reductase family protein | RAM_RS04885 | Not Available | Positive | 1022027 - 1022614 | 21043.0 |
| sigma-70 family rna polymerase sigma factor | RAM_RS04890 | Not Available | Negative | 1022604 - 1023458 | 30226.4 |
| alkene reductase | RAM_RS04895 | Not Available | Positive | 1023524 - 1024573 | 37057.8 |
| hypothetical protein | RAM_RS04900 | Not Available | Negative | 1024531 - 1024716 | 6449.81 |
| voc family protein | RAM_RS04905 | Not Available | Negative | 1024803 - 1025141 | 11882.7 |
| duf6223 family protein | RAM_RS04910 | Not Available | Negative | 1025152 - 1025472 | 10127.7 |
| sensor histidine kinase | RAM_RS04915 | Not Available | Positive | 1025664 - 1026764 | 38136.8 |
| response regulator | RAM_RS04920 | Not Available | Positive | 1026761 - 1027417 | 23520.6 |
| c40 family peptidase | RAM_RS04925 | Not Available | Negative | 1027420 - 1028448 | 34732.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
